JNB_02100 protein (Janibacter sp. HTCC2649) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

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second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

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Score

JNB_02100

MgtE domain protein (311 aa)

Predicted Functional Partners:

JNB_02095

0.967

JNB_02105

0.628

JNB_03995

0.478

JNB_02110

0.464

Your Current Organism:

Janibacter sp. HTCC2649

NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
JNB_02095	JNB_02100	Putative cation transporter	MgtE domain protein	0.967
JNB_02095	JNB_02105	Putative cation transporter	Pyruvate phosphate dikinase	0.638
JNB_02095	JNB_03995	Putative cation transporter	Uncharacterized protein	0.437
JNB_02100	JNB_02095	MgtE domain protein	Putative cation transporter	0.967
JNB_02100	JNB_02105	MgtE domain protein	Pyruvate phosphate dikinase	0.628
JNB_02100	JNB_02110	MgtE domain protein	Uncharacterized protein	0.464
JNB_02100	JNB_03995	MgtE domain protein	Uncharacterized protein	0.478
JNB_02105	JNB_02095	Pyruvate phosphate dikinase	Putative cation transporter	0.638
JNB_02105	JNB_02100	Pyruvate phosphate dikinase	MgtE domain protein	0.628
JNB_02105	JNB_02110	Pyruvate phosphate dikinase	Uncharacterized protein	0.497
JNB_02110	JNB_02100	Uncharacterized protein	MgtE domain protein	0.464
JNB_02110	JNB_02105	Uncharacterized protein	Pyruvate phosphate dikinase	0.497
JNB_03995	JNB_02095	Uncharacterized protein	Putative cation transporter	0.437
JNB_03995	JNB_02100	Uncharacterized protein	MgtE domain protein	0.478

Network

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Cooccurrence

Experiments

Coexpression

Databases

Fusion

© STRING Consortium 2017

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