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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_02230Probable transmembrane transport protein; COG1175 ABC-type sugar transport systems, permease components. (323 aa)    
Predicted Functional Partners:
JNB_16454
ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.999
JNB_15433
Probable ABC transporter permease protein; COG0395 ABC-type sugar transport system, permease component.
 0.997
JNB_14833
COG0395 ABC-type sugar transport system, permease component.
 0.996
JNB_02225
Putative lipoprotein; COG1653 ABC-type sugar transport system, periplasmic component.
 
 0.991
JNB_02235
Probable transmembrane transport protein; COG0395 ABC-type sugar transport system, permease component.
 0.989
JNB_06844
Probable ABC transporter permease protein; COG0395 ABC-type sugar transport system, permease component.
 0.954
JNB_01865
COG0395 ABC-type sugar transport system, permease component.
 0.953
JNB_11004
Putative binding protein-dependent transport protein; COG0395 ABC-type sugar transport system, permease component.
 
 0.953
JNB_11349
Glycerol-3-phosphate ABC transporter permease protein; COG0395 ABC-type sugar transport system, permease component.
 0.953
JNB_13848
Putative transport system integral membrane protein; COG0395 ABC-type sugar transport system, permease component.
 
 0.953
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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