STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lntPutative polyprenol phosphate mannosyl transferase 2; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. (536 aa)    
Predicted Functional Partners:
JNB_02825
COG0463 Glycosyltransferases involved in cell wall biogenesis.
    
 0.941
JNB_02835
Hypothetical protein; COG1607 Acyl-CoA hydrolase.
       0.807
JNB_02840
D-lysine 5,6-aminomutase beta subunit; COG0133 Tryptophan synthase beta chain.
       0.807
JNB_02845
Lysine 5,6-aminomutase alpha subunit.
       0.799
JNB_02850
Zn-dependent alcohol dehydrogenase and related dehydrogenase protein.
       0.797
lspA
Putative signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
 
   
 0.794
JNB_02820
COG3030 Protein affecting phage T7 exclusion by the F plasmid.
  
    0.682
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
     
 0.617
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.613
JNB_02855
COG1509 Lysine 2,3-aminomutase.
       0.593
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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