Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JNB_03025VCBS; COG3210 Large exoproteins involved in heme utilization or adhesion. (2343 aa)    
Predicted Functional Partners:
JNB_03020
COG4675 Microcystin-dependent protein.
 
 
   0.806
JNB_03015
COG4675 Microcystin-dependent protein.
 
 
   0.802
JNB_03010
COG4675 Microcystin-dependent protein.
 
 
   0.799
JNB_03005
Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
     0.748
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
     
  0.604
JNB_14433
Fibronectin type III domain protein; COG1409 Predicted phosphohydrolases.
  
  0.566
JNB_08014
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
   
   0.456
JNB_00150
COG0658 Predicted membrane metal-binding protein.
  
  
 0.440
JNB_03030
Hypothetical protein.
       0.427
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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