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JNB_03310 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_03310" - Putative ABC transporter ATP binding protein in Janibacter sp. HTCC2649
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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JNB_03310Putative ABC transporter ATP binding protein (532 aa)    
Predicted Functional Partners:
rplA
50S ribosomal protein L1 ; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (240 aa)
     
      0.764
rplE
50S ribosomal protein L5 ; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (192 aa)
   
      0.759
JNB_03315
Putative metalloprotease (302 aa)
              0.727
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (295 aa)
 
 
  0.637
rpmG
50S ribosomal protein L33 (55 aa)
     
      0.637
rpsG
30S ribosomal protein S7 ; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (156 aa)
   
      0.634
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (312 aa)
   
 
  0.631
JNB_03305
ABC-type multidrug transport system ATPase and permease component (628 aa)
   
 
0.627
JNB_02895
Putative ATP-dependent RNA helicase (956 aa)
   
        0.615
JNB_03675
30S ribosomal protein S1 (502 aa)
 
        0.596
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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