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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_03355Putative iron-regulated ABC-type transporter; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component. (368 aa)    
Predicted Functional Partners:
JNB_03345
Multidrug Resistance Exporter; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
 
 
 0.999
JNB_03335
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
 
  
 0.993
JNB_03340
Cysteine desulphurases, SufS; COG0520 Selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.983
JNB_03330
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
   
 0.940
JNB_00125
Putative aminotransferase; COG0520 Selenocysteine lyase.
 
 
 0.889
JNB_03350
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
 
     0.866
JNB_03360
Hypothetical protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
   
0.858
JNB_16043
Putative aminotransferase; COG0520 Selenocysteine lyase.
 
 
 0.851
JNB_03325
Hypothetical protein; COG1503 Peptide chain release factor 1 (eRF1).
       0.783
JNB_05090
Putative aminotransferase class-V; COG0520 Selenocysteine lyase.
  
 
 0.729
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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