Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
JNB_03360Hypothetical protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component. (472 aa)    
Predicted Functional Partners:
JNB_03345
Multidrug Resistance Exporter; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
 0.999
JNB_03335
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
 
 
 0.990
JNB_03365
Putative DNA-binding protein; COG2345 Predicted transcriptional regulator.
  
  
 0.973
JNB_03355
Putative iron-regulated ABC-type transporter; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
  
0.972
JNB_03340
Cysteine desulphurases, SufS; COG0520 Selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.968
JNB_03330
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
   
 0.910
JNB_00125
Putative aminotransferase; COG0520 Selenocysteine lyase.
 
 
 0.905
JNB_16043
Putative aminotransferase; COG0520 Selenocysteine lyase.
 
 
 0.841
JNB_03350
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
 
     0.739
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
  0.708
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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