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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_03365Putative DNA-binding protein; COG2345 Predicted transcriptional regulator. (230 aa)    
Predicted Functional Partners:
JNB_03360
Hypothetical protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
  
    0.970
JNB_00175
Putative SIR2-like regulatory protein; COG0846 NAD-dependent protein deacetylases, SIR2 family.
   
    0.784
JNB_06834
Possible MarR-transcriptional regulator; COG1846 Transcriptional regulators.
   
    0.778
JNB_03335
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
  
  
 0.748
JNB_03355
Putative iron-regulated ABC-type transporter; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
  
    0.724
JNB_18498
Cell envelope-related transcriptional attenuator; COG1316 Transcriptional regulator.
  
    0.709
JNB_16289
COG1316 Transcriptional regulator.
  
    0.696
JNB_03350
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
       0.693
JNB_03345
Multidrug Resistance Exporter; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
  
    0.685
JNB_03330
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
       0.669
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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