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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_03385Putative integral membrane transport protein; COG0842 ABC-type multidrug transport system, permease component. (253 aa)    
Predicted Functional Partners:
JNB_03380
COG1131 ABC-type multidrug transport system, ATPase component.
 
 
  0.911
JNB_03425
COG1612 Uncharacterized protein required for cytochrome oxidase assembly.
 
   
 0.715
JNB_01765
Hypothetical protein.
  
     0.628
JNB_03365
Putative DNA-binding protein; COG2345 Predicted transcriptional regulator.
 
     0.600
JNB_03370
CDP-diacylglycerol--serine O-phosphatidyltransferase; COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.569
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.569
JNB_03360
Hypothetical protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
       0.536
JNB_03140
Hypothetical protein.
  
     0.490
JNB_03355
Putative iron-regulated ABC-type transporter; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
       0.469
JNB_03350
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
       0.467
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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