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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_03395Putative transmembrane efflux protein; COG0477 Permeases of the major facilitator superfamily. (183 aa)    
Predicted Functional Partners:
JNB_03390
Putative transmembrane efflux protein; COG0477 Permeases of the major facilitator superfamily.
     0.991
JNB_03400
Hypothetical protein.
       0.773
JNB_06884
Putative transporter; COG0477 Permeases of the major facilitator superfamily.
  
     0.737
JNB_15498
Aminoglycosides/tetracycline-transport integral membrane protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.711
JNB_05974
Putative multidrug resistance efflux protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.666
JNB_17603
COG0367 Asparagine synthase (glutamine-hydrolyzing).
      
 0.563
JNB_03405
COG1309 Transcriptional regulator.
       0.502
JNB_04625
Putative 3-oxoacyl-ACP synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
   
  
 0.464
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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