STRINGSTRING
JNB_03395 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_03395" - Putative transmembrane efflux protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_03395Putative transmembrane efflux protein (183 aa)    
Predicted Functional Partners:
JNB_03390
Putative transmembrane efflux protein (307 aa)
          0.962
JNB_03815
Putative glutamate synthase (NADPH) large subunit (1514 aa)
       
  0.928
JNB_03400
Uncharacterized protein (68 aa)
              0.859
JNB_06599
Putative transporter (522 aa)
 
          0.777
JNB_15498
Aminoglycosides/tetracycline-transport integral membrane protein (531 aa)
   
          0.753
JNB_06884
Putative transporter (479 aa)
   
          0.721
gcvP
Glycine dehydrogenase (aminomethyl-transferring) ; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (962 aa)
         
  0.710
kgd
Alpha-ketoglutarate decarboxylase (1281 aa)
         
  0.697
JNB_17578
Putative ABC transporter transmembrane protein (577 aa)
   
  0.660
JNB_17573
Putative ABC transporter (597 aa)
     
  0.569
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (13%) [HD]