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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_03580Hypothetical protein; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]. (227 aa)    
Predicted Functional Partners:
JNB_03585
COG0491 Zn-dependent hydrolases, including glyoxylases.
       0.821
JNB_03575
Hypothetical protein.
       0.782
JNB_03590
Putative integral membrane protein; COG5006 Predicted permease, DMT superfamily.
       0.717
JNB_03570
Hypothetical protein; COG3547 Transposase and inactivated derivatives.
       0.570
JNB_04795
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
  
     0.532
JNB_18353
Putative DNA-binding protein; COG1396 Predicted transcriptional regulators.
  
     0.500
JNB_15303
Hypothetical protein.
  
     0.493
JNB_18133
Hypothetical protein.
  
     0.478
JNB_05010
Hypothetical protein.
  
     0.465
JNB_20003
Hypothetical protein.
  
     0.427
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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