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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_04045Hypothetical protein. (341 aa)    
Predicted Functional Partners:
JNB_06704
Putative cell division-related protein; COG1716 FOG: FHA domain.
 
    0.724
JNB_06709
Hypothetical protein.
  
    0.716
JNB_06724
Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
  
     0.642
JNB_01635
COG0515 Serine/threonine protein kinase.
  
     0.628
JNB_04040
COG0500 SAM-dependent methyltransferases.
  
    0.559
JNB_06169
Hypothetical protein; COG1396 Predicted transcriptional regulators.
  
    0.559
JNB_00250
Hypothetical protein.
  
     0.552
JNB_06719
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
  
     0.538
JNB_20083
Hypothetical protein.
  
     0.525
JNB_00410
Hypothetical protein; COG4208 ABC-type sulfate transport system, permease component.
  
     0.524
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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