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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_04545Hypothetical protein. (275 aa)    
Predicted Functional Partners:
JNB_04540
COG1579 Zn-ribbon protein, possibly nucleic acid-binding; possible nucleic acid-binding.
  
  
 0.878
ribA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
  0.807
JNB_04535
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
       0.663
metZ
Putative O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
       0.644
JNB_03805
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
 
 
  0.639
JNB_04525
O-succinylhomoserine sulfhydrylase.
       0.636
JNB_09454
SulD; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
    
  0.632
JNB_14198
Hypothetical protein; COG2049 Allophanate hydrolase subunit 1.
  
  
 0.608
JNB_04550
Putative thiol-specific antioxidant protein; COG1225 Peroxiredoxin.
       0.595
folE
COG0302 GTP cyclohydrolase I.
    
 0.560
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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