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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_04560COG3428 Predicted membrane protein. (526 aa)    
Predicted Functional Partners:
JNB_04565
Putative integral membrane protein.
 
  
 0.974
JNB_04555
Hypothetical protein.
       0.788
JNB_04550
Putative thiol-specific antioxidant protein; COG1225 Peroxiredoxin.
       0.721
JNB_11244
Protoporphyrinogen oxidase.
 
    0.508
JNB_04540
COG1579 Zn-ribbon protein, possibly nucleic acid-binding; possible nucleic acid-binding.
  
    0.473
aceE
Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
       0.462
JNB_04545
Hypothetical protein.
       0.453
JNB_06984
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.450
JNB_09449
Hypothetical protein.
 
     0.440
JNB_07584
Hypothetical protein.
  
    0.427
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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