STRINGSTRING
JNB_04780 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_04780" - Transcriptional regulator, NifR3/Smm1 family protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_04780Transcriptional regulator, NifR3/Smm1 family protein (407 aa)    
Predicted Functional Partners:
JNB_04775
Uncharacterized protein (220 aa)
              0.829
JNB_04770
Deoxyguanosinetriphosphate triphosphohydrolase-like protein (408 aa)
              0.805
JNB_04785
Thiosulfate sulfurtransferase (275 aa)
              0.658
JNB_18393
Maf-like protein JNB_18393 (222 aa)
 
        0.655
trmB
tRNA(m7G46)-methyltransferase ; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (227 aa)
 
 
  0.626
JNB_01915
Putative ferredoxin-nitrite reductase (567 aa)
        
      0.604
JNB_09454
7,8-dihydroneopterin aldolase ; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin (294 aa)
   
        0.595
JNB_03775
DNA polymerase (889 aa)
 
   
  0.575
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (529 aa)
   
   
  0.573
JNB_00995
Transfer protein Tra-like (1920 aa)
   
   
  0.570
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (5%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >