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JNB_04795 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_04795" - Putative RNA polymerase ECF-subfamily sigma factor in Janibacter sp. HTCC2649
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_04795Putative RNA polymerase ECF-subfamily sigma factor (558 aa)    
Predicted Functional Partners:
JNB_07484
Uncharacterized protein (297 aa)
   
          0.667
JNB_03490
RNA polymerase-binding protein RbpA ; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (100 aa)
   
          0.631
JNB_13373
Putative integral membrane protein (279 aa)
   
          0.615
JNB_13578
Putative transcriptional regulator PadR-like family protein (192 aa)
   
          0.592
JNB_07194
Superoxide dismutase (133 aa)
   
          0.549
JNB_04805
Putative oxidoreductase (365 aa)
              0.547
JNB_04800
Putative NAD(P)H-dependent FMN reductase (219 aa)
              0.547
JNB_03325
Uncharacterized protein (177 aa)
   
          0.547
JNB_15358
Putative secreted protein (235 aa)
   
          0.535
JNB_07349
Uncharacterized protein (53 aa)
   
          0.512
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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