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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_04895Hypothetical protein; COG1737 Transcriptional regulators. (282 aa)    
Predicted Functional Partners:
JNB_04900
Hypothetical protein; COG0121 Predicted glutamine amidotransferase.
 
     0.813
JNB_08914
COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
  
 
  0.710
JNB_04905
GlnA3; COG0174 Glutamine synthetase.
 
    0.628
JNB_04920
Hypothetical protein; COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
     0.613
JNB_04910
COG0531 Amino acid transporters.
 
    0.573
JNB_03470
COG0166 Glucose-6-phosphate isomerase.
    
 0.561
JNB_03460
COG0021 Transketolase; Belongs to the transketolase family.
     
 0.528
JNB_04915
Putative aminotransferase protein; COG0160 4-aminobutyrate aminotransferase and related aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.471
JNB_15223
ABC transporter, ATP-binding protein; COG1122 ABC-type cobalt transport system, ATPase component.
  
    0.445
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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