STRINGSTRING
JNB_05575 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_05575" - Probable dtdp-glucose 4,6-dehydratase transmembrane protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_05575Probable dtdp-glucose 4,6-dehydratase transmembrane protein (603 aa)    
Predicted Functional Partners:
JNB_05570
Putative lipopolysaccharide biosynthesis protein (441 aa)
   
 
  0.963
JNB_18028
Capsular polysaccharide synthesis enzyme CapF (368 aa)
   
 
  0.962
JNB_18053
Putative aminotransferase (380 aa)
 
 
  0.950
JNB_18063
Cell surface polysaccharide biosynthesis / Chain length determinant protein (479 aa)
 
   
  0.873
JNB_18548
Aspartate aminotransferase (365 aa)
 
 
  0.867
JNB_18558
Putative UDP-N-acetylglucosamine 2-epimerase (356 aa)
   
 
  0.862
JNB_18023
O-antigen biosynthesis protein (377 aa)
   
 
  0.862
JNB_05605
dTDP-4-dehydrorhamnose 3,5-epimerase (197 aa)
   
 
  0.844
JNB_00030
Glucose-1-phosphate thymidylyltransferase ; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis (292 aa)
       
  0.819
JNB_00030
No annotation available (292 aa)
       
  0.819
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (18%) [HD]