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JNB_06404 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_06404" - Putative fumarylacetoacetase in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_06404Putative fumarylacetoacetase (409 aa)    
Predicted Functional Partners:
JNB_06394
Putative dioxygenase (416 aa)
 
   
  0.957
JNB_06399
Uncharacterized protein (286 aa)
 
          0.951
JNB_06449
Putative 4-hydroxyphenylpyruvate dioxygenase (420 aa)
 
   
  0.893
kgd
Alpha-ketoglutarate decarboxylase (1281 aa)
   
    0.840
JNB_02090
Putative oxidoreductase (943 aa)
   
 
    0.819
JNB_07989
Fumarate hydratase class I (571 aa)
       
    0.811
fumC
Fumarate hydratase class II (472 aa)
     
    0.764
JNB_16993
Succinate dehydrogenase (679 aa)
   
 
    0.748
JNB_05315
Succinate dehydrogenase (621 aa)
   
 
    0.748
JNB_16998
Succinate dehydrogenase (247 aa)
   
 
    0.729
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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