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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_06554COG3237 Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family. (57 aa)    
Predicted Functional Partners:
JNB_12618
COG2823 Predicted periplasmic or secreted lipoprotein.
  
    0.785
JNB_06549
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
       0.557
JNB_12009
Hypothetical protein; COG2388 Predicted acetyltransferase.
   
    0.523
JNB_19458
Hypothetical protein.
   
    0.507
JNB_08004
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
    0.497
JNB_03660
Putative ATP binding protein.
  
    0.495
JNB_12763
Hypothetical protein; COG3467 Predicted flavin-nucleotide-binding protein.
  
    0.495
JNB_13283
Hypothetical protein.
  
    0.495
JNB_14318
COG3871 Uncharacterized stress protein (general stress protein 26).
  
    0.495
JNB_18518
ABC transporter ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
  
    0.470
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.