Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JNB_06804Hypothetical protein; COG0498 Threonine synthase. (420 aa)    
Predicted Functional Partners:
JNB_06809
COG4947 Uncharacterized protein conserved in bacteria.
 
     0.925
JNB_06814
Hypothetical protein; COG2382 Enterochelin esterase and related enzymes.
 
     0.920
JNB_03815
Putative glutamate synthase (NADPH) large subunit; COG0067 Glutamate synthase domain 1.
    
 0.800
JNB_06819
COG3118 Thioredoxin domain-containing protein.
     
 0.626
JNB_03240
Cyanophycin synthetase; COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; Belongs to the MurCDEF family.
 
  
 0.623
JNB_09224
Hypothetical protein.
  
     0.613
JNB_07084
Hypothetical protein.
  
     0.572
JNB_20053
Hypothetical protein.
  
     0.561
JNB_20048
Hypothetical protein; COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains.
  
     0.559
rplW
50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.
    
   0.541
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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