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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_07154Putative ABC transport system membrane protein. (268 aa)    
Predicted Functional Partners:
JNB_07149
COG1131 ABC-type multidrug transport system, ATPase component.
 
     0.896
JNB_13373
Putative integral membrane protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
  0.613
JNB_07139
COG1253 Hemolysins and related proteins containing CBS domains.
  
    0.598
JNB_00390
Hypothetical protein.
  
     0.595
JNB_14598
Hypothetical protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
 
  0.590
JNB_17338
Putative ABC transporter membrane protein; COG0842 ABC-type multidrug transport system, permease component.
 
 
 0.586
JNB_07144
COG1253 Hemolysins and related proteins containing CBS domains.
  
    0.582
JNB_13083
Putative transmembrane transport protein; COG0559 Branched-chain amino acid ABC-type transport system, permease components.
  
  0.547
JNB_16108
Hypothetical protein.
  
  0.547
kgd
Alpha-ketoglutarate decarboxylase; COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
       0.523
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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