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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_07604Hypothetical protein; COG3934 Endo-beta-mannanase. (416 aa)    
Predicted Functional Partners:
JNB_07599
RIO1/ZK632.3/MJ0444 family protein; COG1718 Serine/threonine protein kinase involved in cell cycle control.
 
     0.657
JNB_07614
Putative membrane protein; COG3291 FOG: PKD repeat.
  
     0.565
JNB_17798
COG3345 Alpha-galactosidase.
    
  0.518
JNB_10329
Xylose isomerase.
    
  0.504
JNB_05085
Hypothetical protein.
     
 0.482
JNB_07609
COG1874 Beta-galactosidase.
  
  
  0.480
JNB_13833
Oxidoreductase with transcriptional repressor domain; COG0673 Predicted dehydrogenases and related proteins.
  
     0.480
JNB_02225
Putative lipoprotein; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.460
JNB_20183
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.435
JNB_15178
COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
     0.434
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.