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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_07714Hypothetical protein. (102 aa)    
Predicted Functional Partners:
JNB_10109
Putative transpeptidase; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
   
 
 0.870
JNB_13593
COG0744 Membrane carboxypeptidase (penicillin-binding protein).
   
 
 0.870
JNB_07699
Integral membrane protein; COG0628 Predicted permease.
       0.825
JNB_07709
Hypothetical protein; COG0502 Biotin synthase and related enzymes.
       0.775
JNB_07704
Hypothetical protein.
       0.773
JNB_07719
Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family.
       0.747
JNB_07724
COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
       0.703
JNB_01590
COG0515 Serine/threonine protein kinase.
  
 
 0.609
JNB_01635
COG0515 Serine/threonine protein kinase.
  
 
 0.609
JNB_13208
Tyrosine protein kinase:Serine/threonine protein kinase:PASTA; COG0515 Serine/threonine protein kinase.
  
 
 0.609
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.