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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_07884Hypothetical protein; COG0428 Predicted divalent heavy-metal cations transporter. (347 aa)    
Predicted Functional Partners:
JNB_07889
Galactosyltransferase or lps biosynthesis RfbU-related protein; COG0438 Glycosyltransferase.
     0.900
JNB_06044
Putative alpha-amylase; COG0296 1,4-alpha-glucan branching enzyme.
   
  0.625
JNB_14528
COG0296 1,4-alpha-glucan branching enzyme.
   
  0.625
JNB_17613
COG2120 Uncharacterized proteins, LmbE homologs.
 
 
  0.595
JNB_07399
COG0210 Superfamily I DNA and RNA helicases.
    
   0.554
JNB_07879
Hypothetical protein; COG0671 Membrane-associated phospholipid phosphatase.
  
 
  0.542
JNB_07194
Superoxide dismutase.
  
     0.536
JNB_07874
TcrA; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.521
JNB_18028
Capsular polysaccharide synthesis enzyme CapF; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
 
 0.507
JNB_18778
Hypothetical protein; COG1737 Transcriptional regulators.
  
     0.497
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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