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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_08024Putative ABC transporter permease protein; COG0765 ABC-type amino acid transport system, permease component. (274 aa)    
Predicted Functional Partners:
JNB_08029
Putative ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 0.999
JNB_08019
Putative ABC transporter substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 0.998
JNB_04735
Glutamate uptake system ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 0.973
JNB_04740
Glutamate-binding protein of ABC transporter system; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 0.914
JNB_13003
Putative transporter substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
 0.848
JNB_17823
AccD3; COG0777 Acetyl-CoA carboxylase beta subunit.
   
   0.617
JNB_04750
Putative glutamate transporter permease protein; COG0765 ABC-type amino acid transport system, permease component.
 
  
 
0.531
JNB_04745
Putative glutamate transporter; COG0765 ABC-type amino acid transport system, permease component.
  
  
 
0.506
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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