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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_08059Monooxygenase, flavin-binding family protein; COG2072 Predicted flavoprotein involved in K+ transport. (457 aa)    
Predicted Functional Partners:
JNB_17258
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
     
 0.738
atpA
ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
   0.641
JNB_08049
COG0640 Predicted transcriptional regulators.
       0.639
JNB_08054
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
       0.639
rpsI
COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
   0.638
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
   
   0.622
JNB_11144
Putative fatty acid oxidative multifunctional enzyme; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 
 
 0.593
atpG
ATP synthase, gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.526
rpsB
COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
    
 
 0.503
JNB_09309
Putative epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
   
   0.486
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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