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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_08409Putative mce-related protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component. (342 aa)    
Predicted Functional Partners:
JNB_08429
Putative ABC transporter ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
 0.997
JNB_08419
Putative ABC transporter integral membrane protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 0.996
JNB_08424
Putative ABC transporter integral membrane protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 0.995
JNB_08414
Putative mce-related protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 
0.978
JNB_08394
Putative mce-related protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 
0.975
JNB_08399
Putative mce-related protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 
0.974
JNB_08404
Putative mce-related protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 
0.973
JNB_08379
Hypothetical protein.
 
  
 0.947
JNB_08389
Putative mce-related protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 
0.946
JNB_08384
Hypothetical protein.
 
  
 0.944
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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