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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_09239Conserved protein, putative c-type cytochrome biogenesis protein; COG1333 ResB protein required for cytochrome c biosynthesis. (528 aa)    
Predicted Functional Partners:
JNB_09234
Putative cytochrome C assembly protein; COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component.
 
  
 0.993
JNB_09244
COG0785 Cytochrome c biogenesis protein.
 
  
 0.975
JNB_09249
Thiol:disulfide interchange protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
  
 0.965
JNB_00930
COG0785 Cytochrome c biogenesis protein.
 
  
 0.898
JNB_09254
Putative phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase.
  
    0.871
JNB_00925
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
  
 0.861
JNB_09229
Hypothetical protein.
       0.831
JNB_01475
COG2010 Cytochrome c, mono- and diheme variants.
 
  
 0.784
hemL
COG0001 Glutamate-1-semialdehyde aminotransferase.
  
  
 0.784
JNB_09279
Putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase; COG0007 Uroporphyrinogen-III methylase.
  
    0.727
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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