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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_09354COG4409 Neuraminidase (sialidase). (984 aa)    
Predicted Functional Partners:
JNB_07609
COG1874 Beta-galactosidase.
  
 0.938
JNB_17778
COG1874 Beta-galactosidase.
  
 0.938
JNB_15923
Probable phosphonate monoester hydrolase; COG3119 Arylsulfatase A and related enzymes.
  
 
  0.838
JNB_06479
Putative protein involving differentiation; COG1061 DNA or RNA helicases of superfamily II.
   
    0.770
JNB_16679
COG1061 DNA or RNA helicases of superfamily II.
   
    0.770
JNB_09349
COG0506 Proline dehydrogenase.
       0.664
JNB_10379
Putative ABC transporter substrate-binding protein.
 
   
 0.630
JNB_09359
Putative ABC transporter permease protein; COG0842 ABC-type multidrug transport system, permease component.
  
    0.597
JNB_17763
Hypothetical protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
 
 0.584
JNB_09364
Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
       0.551
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.