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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_09384Hypothetical protein. (271 aa)    
Predicted Functional Partners:
JNB_07769
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.657
JNB_09374
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
       0.656
JNB_09379
Putative DNA-binding protein; COG0248 Exopolyphosphatase.
       0.656
JNB_09369
COG1309 Transcriptional regulator.
       0.576
JNB_16354
Hypothetical protein.
  
     0.555
JNB_15103
COG4762 Uncharacterized protein conserved in bacteria.
  
     0.548
JNB_09389
Hypothetical protein.
       0.517
JNB_09359
Putative ABC transporter permease protein; COG0842 ABC-type multidrug transport system, permease component.
       0.499
JNB_10394
Putative membrane protein.
  
     0.474
JNB_09364
Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
       0.440
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.