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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_09684Hypothetical protein; COG2514 Predicted ring-cleavage extradiol dioxygenase. (168 aa)    
Predicted Functional Partners:
JNB_09679
Putative serine esterase; COG0400 Predicted esterase.
 
    0.838
icmF
methylmalonyl-CoA mutase, N-terminal; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
  0.669
JNB_10729
Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
   
 
  0.620
JNB_09689
COG1846 Transcriptional regulators.
 
     0.574
JNB_04095
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
     
 0.536
JNB_12958
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
     
 0.536
JNB_06139
Putative monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
    
 0.511
JNB_09109
Putative monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
    
 0.511
JNB_12124
Putative rifampin monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
    
 0.511
JNB_09669
Hypothetical protein.
       0.495
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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