STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_10024COG1309 Transcriptional regulator. (207 aa)    
Predicted Functional Partners:
JNB_10019
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.876
JNB_10014
Saccharopine dehydrogenase.
 
     0.854
JNB_10009
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
     0.810
JNB_04945
Hypothetical protein.
  
     0.685
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.