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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_11064COG0110 Acetyltransferase (isoleucine patch superfamily). (180 aa)    
Predicted Functional Partners:
JNB_18028
Capsular polysaccharide synthesis enzyme CapF; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
 
 0.543
JNB_18053
Putative aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.465
JNB_18548
Aspartate aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.465
JNB_05515
Protein-tyrosine kinase; COG0489 ATPases involved in chromosome partitioning.
  
  
 0.421
JNB_11059
Hypothetical protein.
       0.410
JNB_18048
Probable glycosyl transferase transmembrane protein; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.407
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.