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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_11084ABC transporter permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (325 aa)    
Predicted Functional Partners:
JNB_11089
Probable ABC-transport protein, inner membrane component; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.980
JNB_11094
ABC peptide transporter, fused ATPase domains; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
 
  0.977
JNB_11079
Possible dipeptide ABC transporter (dipeptide-binding protein); COG0747 ABC-type dipeptide transport system, periplasmic component.
  0.975
JNB_11099
AppF; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  0.965
JNB_11409
DppD_1; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 0.933
JNB_11394
ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.917
JNB_07259
Putative peptide ABC transporter, ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.916
JNB_07269
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.916
JNB_20583
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.916
JNB_07814
Probable ABC-transport protein, inner membrane component; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.915
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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