STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_12164Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases. (151 aa)    
Predicted Functional Partners:
JNB_06979
Coenzyme B12-dependent mutase; COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.744
JNB_08914
COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
     
 0.677
JNB_10729
Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
   
 
 0.656
icmF
methylmalonyl-CoA mutase, N-terminal; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.629
JNB_17343
COG1171 Threonine dehydratase.
   
 
  0.618
JNB_13133
Hypothetical protein; COG0262 Dihydrofolate reductase.
  
    0.596
JNB_19298
Probable D-3-phosphoglycerate dehydrogenase; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.574
JNB_08144
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.549
JNB_08149
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.549
JNB_12169
Bacillolysin; COG0055 F0F1-type ATP synthase, beta subunit.
       0.523
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.