STRINGSTRING
JNB_13093 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_13093" - Putative GntR-family transcriptional regulator in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_13093Putative GntR-family transcriptional regulator (112 aa)    
Predicted Functional Partners:
JNB_13088
Putative ABC transporter ATP-binding protein (306 aa)
 
     
  0.977
JNB_13083
Putative transmembrane transport protein (346 aa)
 
          0.969
JNB_13098
Uncharacterized protein (353 aa)
              0.566
JNB_18128
Putative ABC transporter ATP-binding protein (308 aa)
         
  0.436
JNB_17333
Putative ABC transporter ATP-binding protein (322 aa)
         
  0.436
JNB_16103
Putative ABC transporter ATP-binding protein (336 aa)
         
  0.436
JNB_15928
Putative ABC transporter ATP-binding protein (313 aa)
         
  0.436
JNB_15573
Putative ABC transporter ATP-binding protein (289 aa)
         
  0.436
JNB_14593
ABC-type multidrug transport system ATPase component (309 aa)
         
  0.436
JNB_13378
Putative ABC transporter ATP-binding protein (925 aa)
         
  0.436
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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