rplI protein (Janibacter sp. HTCC2649) - STRING interaction network

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gene neighborhood

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Score

rplI

50S ribosomal protein L9; Binds to the 23S rRNA. (148 aa)

Predicted Functional Partners:

rplT

0.999

rpmI

0.999

rpsT

0.999

rpsO

0.999

rpmE

0.999

rpsI

0.999

rplM

0.999

rplQ

0.999

rpsD

0.999

rpsK

0.999

Your Current Organism:

Janibacter sp. HTCC2649

NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplI	rplM	JNB_13618	JNB_08044	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplI	rplQ	JNB_13618	JNB_08094	50S ribosomal protein L9; Binds to the 23S rRNA.	COG0203 Ribosomal protein L17.	0.999
rplI	rplT	JNB_13618	JNB_04415	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.999
rplI	rpmE	JNB_13618	JNB_07079	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L31; Binds the 23S rRNA.	0.999
rplI	rpmI	JNB_13618	JNB_04420	50S ribosomal protein L9; Binds to the 23S rRNA.	COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.999
rplI	rpsD	JNB_13618	JNB_08104	50S ribosomal protein L9; Binds to the 23S rRNA.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rplI	rpsI	JNB_13618	JNB_08039	50S ribosomal protein L9; Binds to the 23S rRNA.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplI	rpsK	JNB_13618	JNB_08109	50S ribosomal protein L9; Binds to the 23S rRNA.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.999
rplI	rpsO	JNB_13618	JNB_05445	50S ribosomal protein L9; Binds to the 23S rRNA.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
rplI	rpsT	JNB_13618	JNB_05105	50S ribosomal protein L9; Binds to the 23S rRNA.	Putative ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.999
rplM	rplI	JNB_08044	JNB_13618	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L9; Binds to the 23S rRNA.	0.999
rplM	rplQ	JNB_08044	JNB_08094	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0203 Ribosomal protein L17.	0.999
rplM	rplT	JNB_08044	JNB_04415	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.999
rplM	rpmE	JNB_08044	JNB_07079	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L31; Binds the 23S rRNA.	0.999
rplM	rpmI	JNB_08044	JNB_04420	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.999
rplM	rpsD	JNB_08044	JNB_08104	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rplM	rpsI	JNB_08044	JNB_08039	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsK	JNB_08044	JNB_08109	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.999
rplM	rpsO	JNB_08044	JNB_05445	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
rplM	rpsT	JNB_08044	JNB_05105	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.999