JNB_14293 protein (Janibacter sp. HTCC2649) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

JNB_14293

Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. (705 aa)

Predicted Functional Partners:

JNB_19268

0.933

JNB_02945

0.911

katG

0.897

JNB_11539

0.894

JNB_07664

0.870

JNB_16649

0.870

JNB_06559

0.851

JNB_15508

0.778

JNB_02425

0.776

JNB_02090

0.757

Your Current Organism:

Janibacter sp. HTCC2649

NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JNB_02090	JNB_06559	JNB_02090	JNB_06559	Putative oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.	COG0693 Putative intracellular protease/amidase.	0.706
JNB_02090	JNB_14293	JNB_02090	JNB_14293	Putative oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	0.757
JNB_02090	JNB_19268	JNB_02090	JNB_19268	Putative oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.	COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase].	0.794
JNB_02425	JNB_14293	JNB_02425	JNB_14293	Probable kyurenine hydrolase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	0.776
JNB_02945	JNB_06559	JNB_02945	JNB_06559	Putative alkyl hydroperoxide reductase; COG0450 Peroxiredoxin.	COG0693 Putative intracellular protease/amidase.	0.592
JNB_02945	JNB_14293	JNB_02945	JNB_14293	Putative alkyl hydroperoxide reductase; COG0450 Peroxiredoxin.	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	0.911
JNB_02945	JNB_15508	JNB_02945	JNB_15508	Putative alkyl hydroperoxide reductase; COG0450 Peroxiredoxin.	Hypothetical protein; COG0512 Anthranilate/para-aminobenzoate synthases component II.	0.493
JNB_02945	katG	JNB_02945	JNB_12693	Putative alkyl hydroperoxide reductase; COG0450 Peroxiredoxin.	Catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.	0.754
JNB_06559	JNB_02090	JNB_06559	JNB_02090	COG0693 Putative intracellular protease/amidase.	Putative oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.	0.706
JNB_06559	JNB_02945	JNB_06559	JNB_02945	COG0693 Putative intracellular protease/amidase.	Putative alkyl hydroperoxide reductase; COG0450 Peroxiredoxin.	0.592
JNB_06559	JNB_14293	JNB_06559	JNB_14293	COG0693 Putative intracellular protease/amidase.	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	0.851
JNB_06559	JNB_15508	JNB_06559	JNB_15508	COG0693 Putative intracellular protease/amidase.	Hypothetical protein; COG0512 Anthranilate/para-aminobenzoate synthases component II.	0.754
JNB_06559	katG	JNB_06559	JNB_12693	COG0693 Putative intracellular protease/amidase.	Catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.	0.565
JNB_07664	JNB_14293	JNB_07664	JNB_14293	Putative protease; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	0.870
JNB_07664	JNB_15508	JNB_07664	JNB_15508	Putative protease; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.	Hypothetical protein; COG0512 Anthranilate/para-aminobenzoate synthases component II.	0.401
JNB_07664	JNB_16649	JNB_07664	JNB_16649	Putative protease; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.	0.741
JNB_11539	JNB_14293	JNB_11539	JNB_14293	Putative oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	0.894
JNB_11539	JNB_19268	JNB_11539	JNB_19268	Putative oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.	COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase].	0.751
JNB_14293	JNB_02090	JNB_14293	JNB_02090	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	Putative oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.	0.757
JNB_14293	JNB_02425	JNB_14293	JNB_02425	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	Probable kyurenine hydrolase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.	0.776