STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_14663Chromosome replication initiation inhibitor protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (313 aa)    
Predicted Functional Partners:
JNB_13278
L-lysine exporter family protein; COG1279 Lysine efflux permease.
 
   
 0.869
JNB_14668
Putative transporter; COG2814 Arabinose efflux permease.
 
     0.725
JNB_14678
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.693
JNB_14673
Hypothetical protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
       0.689
JNB_14683
Probable oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
       0.689
JNB_00175
Putative SIR2-like regulatory protein; COG0846 NAD-dependent protein deacetylases, SIR2 family.
   
    0.646
JNB_03365
Putative DNA-binding protein; COG2345 Predicted transcriptional regulator.
   
    0.639
JNB_00730
Hypothetical protein.
   
   0.581
JNB_11979
Putative transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
    0.530
JNB_03815
Putative glutamate synthase (NADPH) large subunit; COG0067 Glutamate synthase domain 1.
  
  
 0.522
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.