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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_14973Hypothetical protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. (138 aa)    
Predicted Functional Partners:
JNB_14968
Putative 2,5-diketo-D-gluconic acid reductase; COG0656 Aldo/keto reductases, related to diketogulonate reductase.
 
     0.809
JNB_14963
COG4334 Uncharacterized protein conserved in bacteria.
 
     0.713
JNB_14958
Hypothetical protein; COG0716 Flavodoxins.
 
     0.692
JNB_09514
GCN5-related N-acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
    
  0.502
JNB_13783
Transcriptional regulator, GntR family protein; COG2188 Transcriptional regulators.
  
    0.476
JNB_15393
Transcriptional regulator, GntR family protein; COG2188 Transcriptional regulators.
  
    0.476
JNB_11704
COG0015 Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 0.465
sigA
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
   0.445
JNB_00175
Putative SIR2-like regulatory protein; COG0846 NAD-dependent protein deacetylases, SIR2 family.
  
    0.439
pheA
COG0077 Prephenate dehydratase.
  
 
 0.433
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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