STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_15563Hypothetical protein; COG0640 Predicted transcriptional regulators. (185 aa)    
Predicted Functional Partners:
JNB_05225
COG0640 Predicted transcriptional regulators.
  
    0.733
JNB_03430
Putative DNA-binding protein; COG0640 Predicted transcriptional regulators.
  
     0.677
JNB_15568
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
 
     0.668
JNB_15558
Hypothetical protein.
       0.586
JNB_06039
Putative membrane protein.
  
     0.442
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.