Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
JNB_00850 | JNB_16148 | Hypothetical protein. | Hypothetical protein. | 0.411 |
JNB_01445 | JNB_16148 | Hypothetical protein. | Hypothetical protein. | 0.411 |
JNB_01855 | JNB_16148 | Hypothetical protein. | Hypothetical protein. | 0.411 |
JNB_02205 | JNB_16148 | Hypothetical protein. | Hypothetical protein. | 0.411 |
JNB_03010 | JNB_03015 | COG4675 Microcystin-dependent protein. | COG4675 Microcystin-dependent protein. | 0.821 |
JNB_03010 | JNB_03020 | COG4675 Microcystin-dependent protein. | COG4675 Microcystin-dependent protein. | 0.816 |
JNB_03010 | JNB_08014 | COG4675 Microcystin-dependent protein. | COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase. | 0.509 |
JNB_03010 | JNB_16148 | COG4675 Microcystin-dependent protein. | Hypothetical protein. | 0.412 |
JNB_03015 | JNB_03010 | COG4675 Microcystin-dependent protein. | COG4675 Microcystin-dependent protein. | 0.821 |
JNB_03015 | JNB_03020 | COG4675 Microcystin-dependent protein. | COG4675 Microcystin-dependent protein. | 0.822 |
JNB_03015 | JNB_08014 | COG4675 Microcystin-dependent protein. | COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase. | 0.509 |
JNB_03015 | JNB_16148 | COG4675 Microcystin-dependent protein. | Hypothetical protein. | 0.412 |
JNB_03020 | JNB_03010 | COG4675 Microcystin-dependent protein. | COG4675 Microcystin-dependent protein. | 0.816 |
JNB_03020 | JNB_03015 | COG4675 Microcystin-dependent protein. | COG4675 Microcystin-dependent protein. | 0.822 |
JNB_03020 | JNB_08014 | COG4675 Microcystin-dependent protein. | COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase. | 0.509 |
JNB_03020 | JNB_16148 | COG4675 Microcystin-dependent protein. | Hypothetical protein. | 0.412 |
JNB_04810 | JNB_16148 | glycyl-tRNA synthetase. | Hypothetical protein. | 0.411 |
JNB_05729 | JNB_16148 | Secreted protein. | Hypothetical protein. | 0.411 |
JNB_08014 | JNB_03010 | COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase. | COG4675 Microcystin-dependent protein. | 0.509 |
JNB_08014 | JNB_03015 | COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase. | COG4675 Microcystin-dependent protein. | 0.509 |
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