Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
JNB_16574 | JNB_16579 | Putative lipoprotein; COG2321 Predicted metalloprotease. | COG0546 Predicted phosphatases. | 0.701 |
JNB_16574 | JNB_16584 | Putative lipoprotein; COG2321 Predicted metalloprotease. | Hypothetical protein. | 0.477 |
JNB_16574 | JNB_16589 | Putative lipoprotein; COG2321 Predicted metalloprotease. | Hypothetical protein. | 0.477 |
JNB_16579 | JNB_16574 | COG0546 Predicted phosphatases. | Putative lipoprotein; COG2321 Predicted metalloprotease. | 0.701 |
JNB_16579 | JNB_16584 | COG0546 Predicted phosphatases. | Hypothetical protein. | 0.522 |
JNB_16579 | JNB_16589 | COG0546 Predicted phosphatases. | Hypothetical protein. | 0.520 |
JNB_16584 | JNB_16574 | Hypothetical protein. | Putative lipoprotein; COG2321 Predicted metalloprotease. | 0.477 |
JNB_16584 | JNB_16579 | Hypothetical protein. | COG0546 Predicted phosphatases. | 0.522 |
JNB_16584 | JNB_16589 | Hypothetical protein. | Hypothetical protein. | 0.791 |
JNB_16589 | JNB_16574 | Hypothetical protein. | Putative lipoprotein; COG2321 Predicted metalloprotease. | 0.477 |
JNB_16589 | JNB_16579 | Hypothetical protein. | COG0546 Predicted phosphatases. | 0.520 |
JNB_16589 | JNB_16584 | Hypothetical protein. | Hypothetical protein. | 0.791 |