STRINGSTRING
JNB_16629 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_16629" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_16629Uncharacterized protein (248 aa)    
Predicted Functional Partners:
JNB_16639
Uncharacterized protein (215 aa)
          0.852
JNB_01600
Putative transcriptional regulatory protein (129 aa)
   
          0.632
JNB_16624
ESAT-6-like protein (96 aa)
              0.632
JNB_06124
Putative ABC transporter (550 aa)
   
          0.612
JNB_16634
Conserved protein DedA family protein (206 aa)
              0.545
JNB_07219
Anti-sigma factor (104 aa)
   
          0.533
JNB_06129
Putative ABC transporter (571 aa)
   
          0.530
JNB_03490
RNA polymerase-binding protein RbpA ; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (100 aa)
   
          0.524
JNB_01765
Uncharacterized protein (222 aa)
   
          0.517
JNB_04430
Uncharacterized protein (231 aa)
   
          0.498
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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