STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_16958Putative integral membrane protein; COG1928 Dolichyl-phosphate-mannose--protein O-mannosyl transferase. (517 aa)    
Predicted Functional Partners:
JNB_13388
Hypothetical protein; COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives.
  
     0.716
rsmI
Putative tetrapyrrole methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.680
JNB_00680
Hypothetical protein; COG0762 Predicted integral membrane protein.
  
     0.637
JNB_04635
Hypothetical protein; COG0481 Membrane GTPase LepA.
  
     0.615
JNB_20033
COG3393 Predicted acetyltransferase.
  
     0.552
JNB_06494
Hypothetical protein.
  
     0.547
JNB_05110
Putative DNA-binding protein; COG1466 DNA polymerase III, delta subunit.
  
     0.537
JNB_01795
Hypothetical protein.
  
     0.522
JNB_09239
Conserved protein, putative c-type cytochrome biogenesis protein; COG1333 ResB protein required for cytochrome c biosynthesis.
  
     0.522
JNB_02825
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
 
 0.512
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.