Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
JNB_17618N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein; COG0438 Glycosyltransferase. (386 aa)    
Predicted Functional Partners:
JNB_17623
Hypothetical protein; COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
  
    0.792
JNB_17613
COG2120 Uncharacterized proteins, LmbE homologs.
 
 
  0.781
JNB_17608
Hypothetical protein; COG0392 Predicted integral membrane protein.
 
     0.756
glgE
Alpha amylase, catalytic subdomain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
 
 0.674
JNB_06044
Putative alpha-amylase; COG0296 1,4-alpha-glucan branching enzyme.
   
 0.633
JNB_06774
Putative glycogen phosphorylase; COG0058 Glucan phosphorylase.
  
 0.622
JNB_14528
COG0296 1,4-alpha-glucan branching enzyme.
   
 0.618
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 0.581
JNB_07849
Hypothetical protein; COG1640 4-alpha-glucanotransferase.
     
  0.581
JNB_07399
COG0210 Superfamily I DNA and RNA helicases.
    
   0.567
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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