STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_18488COG1960 Acyl-CoA dehydrogenases. (392 aa)    
Predicted Functional Partners:
JNB_11144
Putative fatty acid oxidative multifunctional enzyme; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.913
JNB_19073
COG2025 Electron transfer flavoprotein, alpha subunit.
   0.904
JNB_19068
COG2086 Electron transfer flavoprotein, beta subunit.
 
   0.898
JNB_06979
Coenzyme B12-dependent mutase; COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
  
 
 0.712
JNB_02245
Putative acetyl-coa acyltransferase protein; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.693
JNB_06954
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 0.686
JNB_18483
Hypothetical protein; COG1835 Predicted acyltransferases.
       0.615
JNB_08914
COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
  
 
 0.606
JNB_01525
Putative long chain fatty acid CoA ligase; COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
  
  0.588
JNB_18493
COG0438 Glycosyltransferase.
  
    0.588
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.