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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_18878Probable secretion system protein TadC; COG2064 Flp pilus assembly protein TadC. (301 aa)    
Predicted Functional Partners:
JNB_18863
Probable chromosome partitioning ATPase; COG4963 Flp pilus assembly protein, ATPase CpaE.
 
  
 0.977
JNB_18868
COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.969
JNB_18858
Hypothetical protein.
 
  
 0.947
JNB_18848
Hypothetical protein; COG2610 H+/gluconate symporter and related permeases.
 
    0.934
JNB_18873
Putative membrane protein; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
  
0.930
JNB_09769
Putative conjugal transfer protein; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.872
JNB_06654
Putative type II/type IV pathway secretion protein; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.871
JNB_18853
Hypothetical protein.
 
    0.869
JNB_00780
Secretion system protein; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.866
JNB_06649
COG4965 Flp pilus assembly protein TadB.
 
  
 0.726
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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