Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JNB_19733Putative short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (517 aa)    
Predicted Functional Partners:
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
 
      0.808
JNB_03815
Putative glutamate synthase (NADPH) large subunit; COG0067 Glutamate synthase domain 1.
     
 0.797
JNB_19728
Hypothetical protein; COG1959 Predicted transcriptional regulator.
   
   0.785
JNB_04610
COG0331 (acyl-carrier-protein) S-malonyltransferase.
  
 0.756
JNB_17823
AccD3; COG0777 Acetyl-CoA carboxylase beta subunit.
 
 
 0.750
JNB_08889
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
 0.725
JNB_19738
30S ribosomal protein S16; COG2334 Putative homoserine kinase type II (protein kinase fold).
   
   0.723
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
  0.693
JNB_05345
Putative phenylacetic acid degradation NADH oxidoreductase PaaE; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 0.639
JNB_13863
Putative oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 0.639
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.